miRBase entry: oni-mir-10851-2

Stem-loop oni-mir-10851-2

Accession

MI0035411

Description

Oreochromis niloticus oni-mir-10851-2 precursor miRNA

Sequence

aaagaccuccacagggucuggauccugcaucaggACUCGGAUCUGGAGGUUUUUCU
(((((((((((...(((((((.(((((...))))).))))))))))))))))))..

Structure

--           cag       a     c 
  aaagaccucca   ggucugg uccug  
  |||||||||||   ||||||| ||||| a
  UUUUUGGAGGU   CUAGGCU Aggac  
UC           ---       C     u

Annotation confidence Not enough data

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Genome context

CM001450.1: 34400398-34400453 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10851-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10851

Accession	MIMAT0043372
Description	Oreochromis niloticus oni-miR-10851 mature miRNA
Sequence	35 - ACUCGGAUCUGGAGGUUUUUCU - 56
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774