Stem-loop oni-mir-10858

Accession

MI0035415

Description

Oreochromis niloticus oni-mir-10858 precursor miRNA

Sequence

2552 reads, 3.0 reads per million, 100 experiments

caGCAGCCGGAGCCCGAACACAUCgaggggaacgaUGUGUUCAGGCUCUGGCUGACA
...(((((((((((.((((((((((.......)))))))))).)))))))))))...

Structure

caG           C          ag 
   CAGCCGGAGCC GAACACAUCg  g
   ||||||||||| ||||||||||  g
   GUCGGUCUCGG CUUGUGUagc  g
ACA           A          aa 

Annotation confidence Medium

Genome context

CM001460.1: 12273113-12273169 [-]

Mature oni-miR-10858-5p

• Accession: MIMAT0059730
• Description: Oreochromis niloticus oni-miR-10858-5p mature miRNA
• Sequence: 3 - GCAGCCGGAGCCCGAACACAUC - 24
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10858-3p

• Accession: MIMAT0043379
• Description: Oreochromis niloticus oni-miR-10858-3p mature miRNA
• Sequence: 36 - UGUGUUCAGGCUCUGGCUGACA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774