Stem-loop oni-mir-10873

Accession

MI0035436

Description

Oreochromis niloticus oni-mir-10873 precursor miRNA

Sequence

448 reads, 8.0 reads per million, 55 experiments

UGGCAGAGAUGAAGCGGUUGAGUcagauuuccuucccuuuuauuaacucugcuguccUCGACCGUGUCUCUCUGUAGC
..(((((((.((.(((((((((.(((.........................)))..))))))))).)))))))))...

Structure

-UG       U  A         -U   auuuccuuccc 
   GCAGAGA GA GCGGUUGAG  cag           u
   ||||||| || |||||||||  |||           u
   UGUCUCU CU UGCCAGCUc  guc           u
CGA       -  G         cu   gucucaauuau 

Annotation confidence High

Genome context

CM001465.1: 19565216-19565293 [-]

Mature oni-miR-10873-5p

• Accession: MIMAT0059736
• Description: Oreochromis niloticus oni-miR-10873-5p mature miRNA
• Sequence: 1 - UGGCAGAGAUGAAGCGGUUGAGU - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10873-3p

• Accession: MIMAT0043399
• Description: Oreochromis niloticus oni-miR-10873-3p mature miRNA
• Sequence: 58 - UCGACCGUGUCUCUCUGUAGC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774