Stem-loop oni-mir-10876

Accession

MI0035440

Description

Oreochromis niloticus oni-mir-10876 precursor miRNA

Sequence

787 reads, 2.0 reads per million, 54 experiments

GUGGAGCGACGGCCUGUUGCugcccguggauccugagugaagCACAGGCUGUAAUUCCACUGAG
((((((..(((((((((.(((...(.(((...))).)...))))))))))))..))))))....

Structure

----      CG         U   gcc g   a 
    GUGGAG  ACGGCCUGU GCu   c ugg  
    ||||||  ||||||||| |||   | ||| u
    CACCUU  UGUCGGACA Cga   g guc  
GAGU      AA         -   agu a   c 

Annotation confidence High

Genome context

CM001444.1: 29678177-29678240 [-]

Mature oni-miR-10876-5p

• Accession: MIMAT0059738
• Description: Oreochromis niloticus oni-miR-10876-5p mature miRNA
• Sequence: 1 - GUGGAGCGACGGCCUGUUGC - 20
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10876-3p

• Accession: MIMAT0043403
• Description: Oreochromis niloticus oni-miR-10876-3p mature miRNA
• Sequence: 43 - CACAGGCUGUAAUUCCACUGAG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774