miRBase entry: oni-mir-10882

Stem-loop oni-mir-10882

Accession

MI0035450

Description

Oreochromis niloticus oni-mir-10882 precursor miRNA

Sequence

gggggaggaaguggauguucauuguagcuccuuguuugACUCGGCUUCGUCUCCAACGC
.(((((.(((((.((.((.((....(((.....))))))))).))))).))))).....

Structure

----g     g     g  u  u  uugu   u 
     gggga gaagu ga gu ca    agc c
     ||||| ||||| || || ||    ||| c
     CCUCU CUUCG CU CA gu    uug u
CGCAA     G     G  -  -  ----   u

Annotation confidence Not enough data

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Genome context

CM001449.1: 7161028-7161086 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10882

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10882

Accession	MIMAT0043411
Description	Oreochromis niloticus oni-miR-10882 mature miRNA
Sequence	39 - ACUCGGCUUCGUCUCCAACGC - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774