Stem-loop oni-mir-10887

Accession

MI0035457

Description

Oreochromis niloticus oni-mir-10887 precursor miRNA

Sequence

uuccaacgcuuccugaaagcagcgacgcuaugcuuuucagugaaaguaaaaaguugcUGCUUUUAGAAACCGUUGGAAUU
((((((((.((.((((((((((((((....(((((((....)))))))....)))))))))))))).)).))))))))..

Structure

--        c  c              gcua       c 
  uuccaacg uu cugaaagcagcgac    ugcuuuu a
  |||||||| || ||||||||||||||    |||||||  
  AAGGUUGC AA GAUUUUCGUcguug    augaaag g
UU        C  A              aaaa       u 

Annotation confidence Not enough data

Genome context

CM001454.1: 23270652-23270731 [+]

Mature oni-miR-10887

• Accession: MIMAT0043417
• Description: Oreochromis niloticus oni-miR-10887 mature miRNA
• Sequence: 58 - UGCUUUUAGAAACCGUUGGAAUU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774