Stem-loop oni-mir-10549

Accession

MI0035463

Description

Oreochromis niloticus oni-mir-10549 precursor miRNA

Sequence

107 reads, 1.0 reads per million, 36 experiments

UGAUUACCUUGUCAGACACACAauguggaacauacacauauuguggucuucccUGUCAGGUAAUCAACAAU
(((((((((.(.(((((.(((((((((.........)))))))))))).....)).)))))))))).....

Structure

-----         U U  -----   A         gaa 
     UGAUUACCU G CA     GAC CACAaugug   c
     ||||||||| | ||     ||| |||||||||   a
     ACUAAUGGA C GU     cug guguuauac   u
UAACA         - U  cccuu   -         aca 

Annotation confidence Low

Genome context

GL831499.1: 253613-253683 [-]

Mature oni-miR-10549-5p

• Accession: MIMAT0059742
• Description: Oreochromis niloticus oni-miR-10549-5p mature miRNA
• Sequence: 1 - UGAUUACCUUGUCAGACACACA - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10549-3p

• Accession: MIMAT0043423
• Description: Oreochromis niloticus oni-miR-10549-3p mature miRNA
• Sequence: 54 - UGUCAGGUAAUCAACAAU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774