Stem-loop oni-mir-10597b

Accession

MI0035472

Description

Oreochromis niloticus oni-mir-10597b precursor miRNA

Sequence

4013 reads, 20.0 reads per million, 101 experiments

UAUGACUGGAUGUGUAAAGCGCuuugggguccuuagggaccagUAAAGCGCUAUAUAAAUACAGcccauuua
.....(((....((((.(((((((((.(((((....)))))..))))))))).))))....)))........

Structure

---UAUGA   GAUG    A         -g     u 
        CUG    UGUA AGCGCuuug  ggucc u
        |||    |||| |||||||||  |||||  
        GAC    AUAU UCGCGAAAU  ccagg a
auuuaccc   AUAA    A         ga     g 

Annotation confidence Medium

Genome context

CM001451.1: 1173863-1173934 [-]

Mature oni-miR-10597b-5p

• Accession: MIMAT0043432
• Description: Oreochromis niloticus oni-miR-10597b-5p mature miRNA
• Sequence: 1 - UAUGACUGGAUGUGUAAAGCGC - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10597b-3p

• Accession: MIMAT0059748
• Description: Oreochromis niloticus oni-miR-10597b-3p mature miRNA
• Sequence: 44 - UAAAGCGCUAUAUAAAUACAG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774