miRBase entry: oni-mir-10900a

Stem-loop oni-mir-10900a


Accession
MI0035474
Description
Oreochromis niloticus oni-mir-10900a precursor miRNA


Sequence

4111 reads, 6.0 reads per million, 97 experiments
ucCGGAAGUCUACCACCAGCuccuugguuuuacuaguggugaUCUGGAGGUAGUUCUGCUGGc
.((((.((.(((((.((((..(((((((...))))).))....)))).)))))..)).)))).

Structure
u    A  -U     A    --Cu  -     u 
 cCGG AG  CUACC CCAG    cc uuggu  
 |||| ||  ||||| ||||    || ||||| u
 GGUC UC  GAUGG GGUC    gg gauca  
c    G  UU     A    Uagu  u     u 


Annotation confidence High
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Genome context
CM001446.1: 2973521-2973583 [+]

Database links

Mature oni-miR-10900a-5p

Accession MIMAT0059749
Description Oreochromis niloticus oni-miR-10900a-5p mature miRNA
Sequence 3 - CGGAAGUCUACCACCAGC - 20
Evidence experimental
Illumina [1]

Mature oni-miR-10900a-3p

Accession MIMAT0043434
Description Oreochromis niloticus oni-miR-10900a-3p mature miRNA
Sequence 43 - UCUGGAGGUAGUUCUGCUGG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774