Stem-loop oni-mir-10562

Accession

MI0035485

Description

Oreochromis niloticus oni-mir-10562 precursor miRNA

Sequence

469 reads, 1.0 reads per million, 85 experiments

CCCGCACGCUCAUUGGAUAACGaugugucaaucucgagcuauuAGCCAAUGAGCGUGCGGACUCA
.(((((((((((((((.....((((..((......))..))))..))))))))))))))).....

Structure

----C               AUAAC    ug  aa 
     CCGCACGCUCAUUGG     Gaug  uc  u
     |||||||||||||||     ||||  ||   
     GGCGUGCGAGUAACC     uuau  ag  c
ACUCA               ---GA    cg  cu 

Annotation confidence High

Genome context

GL832886.1: 497-561 [+]

Mature oni-miR-10562-5p

• Accession: MIMAT0059754
• Description: Oreochromis niloticus oni-miR-10562-5p mature miRNA
• Sequence: 1 - CCCGCACGCUCAUUGGAUAACG - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10562-3p

• Accession: MIMAT0043444
• Description: Oreochromis niloticus oni-miR-10562-3p mature miRNA
• Sequence: 44 - AGCCAAUGAGCGUGCGGACUCA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774