Stem-loop oni-mir-184c

Accession

MI0035486

Description

Oreochromis niloticus oni-mir-184c precursor miRNA

Sequence

89502 reads, 156.0 reads per million, 74 experiments

CCUUAUCAGUUCUCCGUCCAacggauacagaaucuauagcUGGGCUGGAAAAGUGAUAAGGAG
((((((((.((.((((((((.(((((.....))))...).))))).))).)).))))))))..

Structure

--        G  C   -     a ---    a 
  CCUUAUCA UU UCC GUCCA c   ggau c
  |||||||| || ||| ||||| |   |||| a
  GGAAUAGU AA AGG CGGGU g   ucua g
GA        G  A   U     c aua    a 

Annotation confidence High

Genome context

CM001444.1: 18708273-18708335 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-184c

Mature oni-miR-184c-5p

• Accession: MIMAT0059755
• Description: Oreochromis niloticus oni-miR-184c-5p mature miRNA
• Sequence: 1 - CCUUAUCAGUUCUCCGUCCA - 20
• Evidence: experimental ; Illumina [1]

Mature oni-miR-184c-3p

• Accession: MIMAT0043445
• Description: Oreochromis niloticus oni-miR-184c-3p mature miRNA
• Sequence: 41 - UGGGCUGGAAAAGUGAUAAGGAG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774