Stem-loop oni-mir-10597d

Accession

MI0035487

Description

Oreochromis niloticus oni-mir-10597d precursor miRNA

Sequence

2161 reads, 20.0 reads per million, 96 experiments

GAUGACUGGAUGUGUAgagcgcuuugggguccuuagggacuaguaaagcgcuaugcaaaaUACAGGCCAUUUACCAUU
((((.(((....((((.(((((((((.(((((....)))))..))))))))).)))).....)))..)))).......

Structure

-------    -A   -GAUG    g         -g     u 
       GAUG  CUG     UGUA agcgcuuug  ggucc u
       ||||  |||     |||| |||||||||  |||||  
       UUAC  GAC     acgu ucgcgaaau  ucagg a
UUACCAU    CG   AUaaa    a         ga     g 

Annotation confidence Medium

Genome context

GL831311.1: 966258-966335 [+]

Mature oni-miR-10597d-5p

• Accession: MIMAT0043446
• Description: Oreochromis niloticus oni-miR-10597d-5p mature miRNA
• Sequence: 1 - GAUGACUGGAUGUGUA - 16
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10597d-3p

• Accession: MIMAT0059756
• Description: Oreochromis niloticus oni-miR-10597d-3p mature miRNA
• Sequence: 61 - UACAGGCCAUUUACCAUU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774