Stem-loop oni-mir-181c-2

Accession

MI0035498

Description

Oreochromis niloticus oni-mir-181c-2 precursor miRNA

Literature search

2 open access papers mention oni-mir-181c-2
(3 sentences)

Sequence

31842876 reads, 32100.0 reads per million, 111 experiments

AACAUUCAACGCUGUCGGUGAGUUugugacucagagaaaACCAUCGAGUGUUGAGUGUACC
.(((((((((((..((((((.((((............)))))))))))))))))))))...

Structure

--A           UG      A    gugac 
   ACAUUCAACGC  UCGGUG GUUu     u
   |||||||||||  |||||| ||||      
   UGUGAGUUGUG  AGCUAC CAaa     c
CCA           --      -    agaga 

Annotation confidence High

Genome context

CM001447.1: 13320141-13320201 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-181c-2

Mature oni-miR-181c-5p

• Accession: MIMAT0043428
• Description: Oreochromis niloticus oni-miR-181c-5p mature miRNA
• Sequence: 1 - AACAUUCAACGCUGUCGGUGAGUU - 24
• Evidence: experimental ; Illumina [1]

Mature oni-miR-181c-2-3p

• Accession: MIMAT0059747
• Description: Oreochromis niloticus oni-miR-181c-2-3p mature miRNA
• Sequence: 40 - ACCAUCGAGUGUUGAGUGUACC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774