Stem-loop oni-mir-10916

Accession

MI0035500

Description

Oreochromis niloticus oni-mir-10916 precursor miRNA

Sequence

241 reads, 1.0 reads per million, 29 experiments

UGCGGCCGAUGGGUGGAAGGAaaaugaugcuggaguauguuUGCUUACAGCCUCUGCUGCACA
((((((.((.((.((..((.(((...((((....)))).))).))..)).)))).))))))..

Structure

--      C  U  G  GA  G   aug    u 
  UGCGGC GA GG UG  AG Aaa   augc g
  |||||| || || ||  || |||   ||||  
  ACGUCG CU CC AC  UC Uuu   uaug g
AC      U  -  G  AU  G   --g    a 

Annotation confidence High

Genome context

CM001451.1: 21952828-21952890 [+]

Mature oni-miR-10916-5p

• Accession: MIMAT0059759
• Description: Oreochromis niloticus oni-miR-10916-5p mature miRNA
• Sequence: 1 - UGCGGCCGAUGGGUGGAAGGA - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10916-3p

• Accession: MIMAT0043456
• Description: Oreochromis niloticus oni-miR-10916-3p mature miRNA
• Sequence: 42 - UGCUUACAGCCUCUGCUGCACA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774