Stem-loop oni-mir-10900b

Accession

MI0035506

Description

Oreochromis niloticus oni-mir-10900b precursor miRNA

Sequence

2361 reads, 5.0 reads per million, 99 experiments

UGUGGAACUCUACCACCAGCUCCuugguuuuauuggugUUGAUCUGGAGGUAGUUCUGCU
.((((((((((.(((.((((.((...........)).))))...))).)).)))))))).

Structure

U        -  A   --C    U  uugg 
 GUGGAACU CU CCA   CAGC CC    u
 |||||||| || |||   |||| ||    u
 CGUCUUGA GG GGU   GUUg gg    u
U        U  A   CUA    u  uuau 

Annotation confidence High

Genome context

CM001459.1: 25194422-25194481 [-]

Mature oni-miR-10900b-5p

• Accession: MIMAT0059760
• Description: Oreochromis niloticus oni-miR-10900b-5p mature miRNA
• Sequence: 1 - UGUGGAACUCUACCACCAGCUCC - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10900b-3p

• Accession: MIMAT0043461
• Description: Oreochromis niloticus oni-miR-10900b-3p mature miRNA
• Sequence: 39 - UUGAUCUGGAGGUAGUUCUGCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774