miRBase entry: oni-mir-199b-3

Stem-loop oni-mir-199b-3

Accession

MI0035507

Description

Oreochromis niloticus oni-mir-199b-3 precursor miRNA

Sequence

UAACCAAUGUGCAGACUACUGUacaccaguaugacaaugaacagguagucugaacacuggg
...(((.(((.(((((((((((((....))))...........))))))))).))).))).

Structure

UAA   A   G         -----------    a 
   CCA UGU CAGACUACU           GUac c
   ||| ||| |||||||||           ||||  
   ggu aca gucugaugg           uaug c
--g   c   a         acaaguaacag    a

Annotation confidence Not enough data

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Genome context

GL831264.1: 905752-905812 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from oni-mir-199b-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-199b

Accession	MIMAT0043142
Description	Oreochromis niloticus oni-miR-199b mature miRNA
Sequence	1 - UAACCAAUGUGCAGACUACUGU - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774