Stem-loop oni-mir-210

Accession

MI0035509

Description

Oreochromis niloticus oni-mir-210 precursor miRNA

Literature search

1 open access papers mention oni-mir-210
(1 sentences)

Sequence

1855339 reads, 1555.0 reads per million, 106 experiments

AGCCACUGACUAACGCACAUUGugccaguuuccaguuccaCUGUGCGUGUGACAGCGGCU
((((.(((.(..(((((((.((.((.........))..)).)))))))..).))).))))

Structure

    A   A UA       U  -u  cag 
AGCC CUG C  ACGCACA UG  gc   u
|||| ||| |  ||||||| ||  ||   u
UCGG GAC G  UGCGUGU ac  ug   u
    C   A UG       C  cu  acc 

Annotation confidence High

Genome context

CM001450.1: 45406578-45406637 [+]

Mature oni-miR-210-5p

• Accession: MIMAT0059762
• Description: Oreochromis niloticus oni-miR-210-5p mature miRNA
• Sequence: 1 - AGCCACUGACUAACGCACAUUG - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-210-3p

• Accession: MIMAT0043463
• Description: Oreochromis niloticus oni-miR-210-3p mature miRNA
• Sequence: 41 - CUGUGCGUGUGACAGCGGCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774