Stem-loop oni-mir-10928

Accession

MI0035517

Description

Oreochromis niloticus oni-mir-10928 precursor miRNA

Sequence

248 reads, 1.0 reads per million, 62 experiments

AAGCACAGACUCUGGCUCAGGACUuguuugaauuucucacuUCCUGUGCUGCAGUUUGUUGC
..(((((((((.((((.(((((..((...........))..))))).)))).)))))).)))

Structure

AA   -      C    U     CU  uuug 
  GCA CAGACU UGGC CAGGA  ug    a
  ||| |||||| |||| |||||  ||    a
  CGU GUUUGA GUCG GUCCU  ac    u
--   U      C    U     uc  ucuu 

Annotation confidence Medium

Genome context

GL831231.1: 1869639-1869700 [+]

Mature oni-miR-10928-5p

• Accession: MIMAT0043471
• Description: Oreochromis niloticus oni-miR-10928-5p mature miRNA
• Sequence: 1 - AAGCACAGACUCUGGCUCAGGACU - 24
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10928-3p

• Accession: MIMAT0059764
• Description: Oreochromis niloticus oni-miR-10928-3p mature miRNA
• Sequence: 42 - UCCUGUGCUGCAGUUUGUUGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774