Stem-loop oni-mir-10939-2

Accession

MI0035531

Description

Oreochromis niloticus oni-mir-10939-2 precursor miRNA

Sequence

174 reads, 2.0 reads per million, 38 experiments

UAUGUGGACAUAAGGCUUACCCaucuuuaccagcaaaauggggAGGUCUAUGUGCACUCGUG
...(((.(((((.((((..(((((.(((......))))))))..))))))))).))).....

Structure

--UAU   G     A    UA     c   ac 
     GUG ACAUA GGCU  CCCau uuu  c
     ||| ||||| ||||  ||||| |||   
     CAC UGUAU CUGG  gggua aaa  a
GUGCU   G     -    Ag     -   cg 

Annotation confidence High

Genome context

GL831439.1: 649732-649793 [+]

Mature oni-miR-10939-5p

• Accession: MIMAT0043483
• Description: Oreochromis niloticus oni-miR-10939-5p mature miRNA
• Sequence: 1 - UAUGUGGACAUAAGGCUUACCC - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10939-2-3p

• Accession: MIMAT0059766
• Description: Oreochromis niloticus oni-miR-10939-2-3p mature miRNA
• Sequence: 44 - AGGUCUAUGUGCACUCGUG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774