Stem-loop oni-mir-10944

Accession

MI0035536

Description

Oreochromis niloticus oni-mir-10944 precursor miRNA

Sequence

1199 reads, 4.0 reads per million, 43 experiments

UGGGUUCAGUGACUACAGACCugucacccugaugUCUGUAGUCAUAAAAUCCUU
.(((((..((((((((((((..((((...))))))))))))))))..)))))..

Structure

-U     CA            Cu    c 
  GGGUU  GUGACUACAGAC  guca  
  |||||  ||||||||||||  |||| c
  CCUAA  UACUGAUGUCUg  uagu  
UU     AA            --    c 

Annotation confidence High

Genome context

CM001449.1: 1777107-1777160 [+]

Mature oni-miR-10944-5p

• Accession: MIMAT0043488
• Description: Oreochromis niloticus oni-miR-10944-5p mature miRNA
• Sequence: 1 - UGGGUUCAGUGACUACAGACC - 21
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10944-3p

• Accession: MIMAT0059769
• Description: Oreochromis niloticus oni-miR-10944-3p mature miRNA
• Sequence: 35 - UCUGUAGUCAUAAAAUCCUU - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774