Stem-loop oni-mir-181c-3

Accession

MI0035538

Description

Oreochromis niloticus oni-mir-181c-3 precursor miRNA

Literature search

2 open access papers mention oni-mir-181c-3
(3 sentences)

Sequence

33452028 reads, 32339.0 reads per million, 116 experiments

AACAUUCAACGCUGUCGGUGAGUUugagcuaaauugaaagaaaaaaaACCAUCGACCGUUGACUGUACC
.(((.((((((..(((((((.((((...((........)).....))))))))))))))))).)))...

Structure

--A   U      CU       A    --gag  aaa 
   ACA UCAACG  GUCGGUG GUUu     cu   u
   ||| ||||||  ||||||| ||||     ||    
   UGU AGUUGC  CAGCUAC CAaa     ga   u
CCA   C      --       -    aaaaa  aag 

Annotation confidence High

Genome context

GL831204.1: 1055516-1055584 [-]

Mature oni-miR-181c-5p

• Accession: MIMAT0043428
• Description: Oreochromis niloticus oni-miR-181c-5p mature miRNA
• Sequence: 1 - AACAUUCAACGCUGUCGGUGAGUU - 24
• Evidence: experimental ; Illumina [1]

Mature oni-miR-181c-3p

• Accession: MIMAT0059746
• Description: Oreochromis niloticus oni-miR-181c-3p mature miRNA
• Sequence: 48 - ACCAUCGACCGUUGACUGUACC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774