Stem-loop oni-mir-10939-3

Accession

MI0035544

Description

Oreochromis niloticus oni-mir-10939-3 precursor miRNA

Sequence

151 reads, 1.0 reads per million, 35 experiments

UAUGUGGACAUAAGGCUUACCCaucuuuaccaguaaaauGGGGUGGUCUAUGUGCACUCGUg
...(((.(((((.((((..(((((.((((....)))))))))..))))))))).))).....

Structure

--UAU   G     A    UA     c    c 
     GUG ACAUA GGCU  CCCau uuua c
     ||| ||||| ||||  ||||| ||||  
     CAC UGUAU CUGG  GGGua aaau a
gUGCU   G     -    UG     -    g 

Annotation confidence Not enough data

Genome context

GL831432.1: 66317-66378 [-]

Mature oni-miR-10939-5p

• Accession: MIMAT0043483
• Description: Oreochromis niloticus oni-miR-10939-5p mature miRNA
• Sequence: 1 - UAUGUGGACAUAAGGCUUACCC - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10939-3-3p

• Accession: MIMAT0059767
• Description: Oreochromis niloticus oni-miR-10939-3-3p mature miRNA
• Sequence: 40 - GGGGUGGUCUAUGUGCACUCGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774