Stem-loop oni-mir-10959

Accession

MI0035556

Description

Oreochromis niloticus oni-mir-10959 precursor miRNA

Sequence

ACAACAGCAGCUGAUUUCACUGugcugucugucgucuaacguuaagugugccaaucagugaaaccaccugcuguaaugc
...(((((((.((.((((((((.((...((..(((...)))...))...))....)))))))).)).))))))).....

Structure

--ACA       C  A        ---u  ugu  -gu   c 
     ACAGCAG UG UUUCACUG    gc   cu   cgu  
     ||||||| || ||||||||    ||   ||   ||| u
     ugucguc ac aaagugac    cg   ga   gca  
cguaa       c  c        uaac  ugu  auu   a 

Annotation confidence Not enough data

Genome context

CM001444.1: 9964680-9964758 [+]

Mature oni-miR-10959

• Accession: MIMAT0043505
• Description: Oreochromis niloticus oni-miR-10959 mature miRNA
• Sequence: 1 - ACAACAGCAGCUGAUUUCACUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774