Stem-loop oni-mir-10939-4

Accession

MI0035562

Description

Oreochromis niloticus oni-mir-10939-4 precursor miRNA

Sequence

164 reads, 2.0 reads per million, 38 experiments

UAUGUGGACAUAAGGCUUACCCaucuuuaccagcaaAAUGGGGAGGUCUAUGUGCACUCaug
...(((.(((((.((((..(((((.(((......))))))))..))))))))).))).....

Structure

--UAU   G     A    UA     c   ac 
     GUG ACAUA GGCU  CCCau uuu  c
     ||| ||||| ||||  ||||| |||   
     CAC UGUAU CUGG  GGGUA Aaa  a
guaCU   G     -    AG     -   cg 

Annotation confidence Not enough data

Genome context

CM001460.1: 5468971-5469032 [-]

Mature oni-miR-10939-5p

• Accession: MIMAT0043483
• Description: Oreochromis niloticus oni-miR-10939-5p mature miRNA
• Sequence: 1 - UAUGUGGACAUAAGGCUUACCC - 22
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10939-4-3p

• Accession: MIMAT0059768
• Description: Oreochromis niloticus oni-miR-10939-4-3p mature miRNA
• Sequence: 37 - AAUGGGGAGGUCUAUGUGCACUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774