Stem-loop oni-mir-203b

Accession

MI0035567

Description

Oreochromis niloticus oni-mir-203b precursor miRNA

Literature search

1 open access papers mention oni-mir-203b
(1 sentences)

Sequence

19889 reads, 16.0 reads per million, 79 experiments

AGUGGUCCUAAACAUUUCACaauuuuguuaaagaacugUUGAACUGUUGAGAACCACUUA
((((((.((.((((.((((((.((((.....)))).)).)))).)))).)).))))))..

Structure

--      C  A    U    -  a    g 
  AGUGGU CU AACA UUCA Ca uuuu u
  |||||| || |||| |||| || |||| u
  UCACCA GA UUGU AAGU gu aaga a
AU      A  G    C    U  c    a 

Annotation confidence High

Genome context

CM001462.1: 1021132-1021191 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-203b

Mature oni-miR-203b-5p

• Accession: MIMAT0059774
• Description: Oreochromis niloticus oni-miR-203b-5p mature miRNA
• Sequence: 1 - AGUGGUCCUAAACAUUUCAC - 20
• Evidence: experimental ; Illumina [1]

Mature oni-miR-203b-3p

• Accession: MIMAT0043515
• Description: Oreochromis niloticus oni-miR-203b-3p mature miRNA
• Sequence: 39 - UUGAACUGUUGAGAACCACUUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774