Stem-loop oni-mir-10969

Accession

MI0035569

Description

Oreochromis niloticus oni-mir-10969 precursor miRNA

Sequence

5940 reads, 9.0 reads per million, 51 experiments

UUCCAUACUUGCACUUUACUGUUuugagugcauaaaUACAGUCAGGCAAGUAUGGCU
..((((((((((.((..(((((.((.........)).))))).))))))))))))..

Structure

UU          A  UU     U  gag 
  CCAUACUUGC CU  ACUGU uu   u
  |||||||||| ||  ||||| ||   g
  GGUAUGAACG GA  UGACA aa   c
UC          -  -C     U  aua 

Annotation confidence High

Genome context

CM001454.1: 5264045-5264101 [+]

Mature oni-miR-10969-5p

• Accession: MIMAT0059775
• Description: Oreochromis niloticus oni-miR-10969-5p mature miRNA
• Sequence: 1 - UUCCAUACUUGCACUUUACUGUU - 23
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10969-3p

• Accession: MIMAT0043517
• Description: Oreochromis niloticus oni-miR-10969-3p mature miRNA
• Sequence: 37 - UACAGUCAGGCAAGUAUGGCU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774