Stem-loop oni-mir-10973

Accession

MI0035575

Description

Oreochromis niloticus oni-mir-10973 precursor miRNA

Sequence

329 reads, 1.0 reads per million, 69 experiments

AGAUGUGGUGAGCAGCCGAUGGAGagaguagaaaugcuCCUGGCAUCGCACCACUUUCUGU
(((.((((((......(((((.((.(((((....)))))))..)))))))))))..)))..

Structure

--   -U      AGCAGC     -G  a     g 
  AGA  GUGGUG      CGAUG  AG gagua a
  |||  ||||||      |||||  || |||||  
  UCU  CACCAC      GCUAC  UC Cucgu a
UG   UU      ------     GG  -     a 

Annotation confidence Medium

Genome context

GL831608.1: 123013-123073 [+]

Mature oni-miR-10973-5p

• Accession: MIMAT0059777
• Description: Oreochromis niloticus oni-miR-10973-5p mature miRNA
• Sequence: 1 - AGAUGUGGUGAGCAGCCGAUGGAG - 24
• Evidence: experimental ; Illumina [1]

Mature oni-miR-10973-3p

• Accession: MIMAT0043521
• Description: Oreochromis niloticus oni-miR-10973-3p mature miRNA
• Sequence: 39 - CCUGGCAUCGCACCACUUUCUGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774