Stem-loop mdm-MIR10981a

Accession

MI0035587

Description

Malus domestica mdm-MIR10981a precursor miRNA

Sequence

ucuauaaaaugggauuuggauccucuccugagcuuaaggagacgauccuccUGACCAACAUAUAUGGGCCGUuggagccguuggauuuucauccaacggcuacaaaaauggagucucuuuaaaguuauaauaauuauagccguuggauuuucauccaacgauccauauauauuggucaggaggauccucuccuuaagcucaggagaggauccaaauccuauaaaaugc
........((((((((((((((((((((((((((((((((((.(((((((((((((((.((((((((((((((..(((((((((((....))))))))))).....)))))............(((((((...)))))))((((((((....)))))))).))))))))).))))))))))))))).)))))))))))))))))))))))))))))))))).......

Structure

ucuauaaa                                  c               C         --------------------------------------------------     ---gg           u 
        augggauuuggauccucuccugagcuuaaggaga gauccuccUGACCAA AUAUAUGGG                                                  CCGUu     agccguuggau u
        |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||                                                  |||||     |||||||||||  
        uauccuaaaccuaggagaggacucgaauuccucu cuaggaggacugguu uauauaccu                                                  gguaa     ucggcaaccua u
-cguaaaa                                  c               a         agcaaccuacuuuuagguugccgauauuaauaauauugaaauuucucuga     aaaca           c 

Annotation confidence Not enough data

Genome context

MDC000839.489: 2465-2692 [+]

Mature mdm-miR10981a

• Accession: MIMAT0043532
• Description: Malus domestica mdm-miR10981a mature miRNA
• Sequence: 52 - UGACCAACAUAUAUGGGCCGU - 72
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812