miRBase entry: mdm-MIR10982d

Stem-loop mdm-MIR10982d


Accession
MI0035593
Description
Malus domestica mdm-MIR10982d precursor miRNA


Sequence

11035 reads, 925.0 reads per million, 26 experiments
augaggCGGGAAUUCAUCGUAAGCUUCauuugaaugaacuugaggaaauaCGGAAUGAAGCUUACGAGAAUGcucgacuuu
..((((((((.((((.(((((((((((((((.....................))))))))))))))))))).)))).))))

Structure
au    -    A    A               gaaugaacu 
  gagg CGGG AUUC UCGUAAGCUUCauuu         u
  |||| |||| |||| |||||||||||||||         g
  uuuc gcuc UAAG AGCAUUCGAAGUAAG         a
--    a    G    -               GCauaaagg 


Annotation confidence Medium
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Genome context
MDC019118.333: 2618-2698 [+]

Database links

Mature mdm-miR10982d-5p

Accession MIMAT0056747
Description Malus domestica mdm-miR10982d-5p mature miRNA
Sequence 7 - CGGGAAUUCAUCGUAAGCUUC - 27
Evidence experimental
unknown

Mature mdm-miR10982d-3p

Accession MIMAT0043538
Description Malus domestica mdm-miR10982d-3p mature miRNA
Sequence 51 - CGGAAUGAAGCUUACGAGAAUG - 72
Evidence experimental
Illumina [1]

References

  1. Identification of apple miRNAs and their potential role in fire blight resistance
    "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
    Tree Genet Genomes. (2014) 11:812