miRBase entry: mdm-MIR10985

Stem-loop mdm-MIR10985


Accession
MI0035603
Description
Malus domestica mdm-MIR10985 precursor miRNA


Sequence

143 reads, 11.0 reads per million, 24 experiments
uagcuugaaguacuuguuaaugggggguggaaaaggUAGUAGAAUACUAAUAACCACUCGUAGUGAAACAGUUGcgaagauau
.........(((.(((((.((.(.((((((....((((......)))).....)))))).).))..))))).)))........

Structure
uagcuugaa   c     -a  g g      -aaaa    GU 
         gua uuguu  au g gggugg     ggUA  A
         ||| |||||  || | ||||||     ||||   
         cGU GACAA  UG U CUCACC     UCAU  G
-uauagaag   U     AG  A G      AAUAA    AA 


Annotation confidence Low
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Genome context
MDC004996.254: 1572-1654 [-]

Database links

Mature mdm-miR10985-5p

Accession MIMAT0056756
Description Malus domestica mdm-miR10985-5p mature miRNA
Sequence 37 - UAGUAGAAUACUAAUAACCACU - 58
Evidence experimental
unknown

Mature mdm-miR10985-3p

Accession MIMAT0043549
Description Malus domestica mdm-miR10985-3p mature miRNA
Sequence 54 - CCACUCGUAGUGAAACAGUUG - 74
Evidence experimental
Illumina [1]

References

  1. Identification of apple miRNAs and their potential role in fire blight resistance
    "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
    Tree Genet Genomes. (2014) 11:812