Stem-loop mdm-MIR10991b

Accession

MI0035616

Description

Malus domestica mdm-MIR10991b precursor miRNA

Sequence

ccuusggacccaaaugaayugaguccaaagaucaaaugauyCGAGCCAUUGAAAUUCGAUCCaacggcugcaauuuuuauaacuuuuagaggaccccuuguuuguagucguuggaucaaauuucaaugacucggaucauuugaugagugggcucaguuucuuuggaucccgaa
.....(((.(((((.(((.((((((((...((((((((((.((((.((((((((((.((((((((((((((((...............((((...))))..)))))))))))))))).)))))))))).)))).))))))))))...)))))))).))).))))).)))....

Structure

ccuus   c     u   y        aag          y    C          C                uuuuuauaacuuuua    a 
     gga ccaaa gaa ugagucca   aucaaaugau CGAG CAUUGAAAUU GAUCCaacggcugcaa               gagg  
     ||| ||||| ||| ||||||||   |||||||||| |||| |||||||||| ||||||||||||||||               |||| c
     ccu gguuu uuu acucgggu   uaguuuacua gcuc guaacuuuaa cuagguugcugauguu               uucc  
-aagc   a     c   g        gag          g    a          a                -------------ug    c 

Annotation confidence Not enough data

Genome context

MDC005447.312: 1469-1641 [+]

Mature mdm-miR10991b

• Accession: MIMAT0043562
• Description: Malus domestica mdm-miR10991b mature miRNA
• Sequence: 42 - CGAGCCAUUGAAAUUCGAUCC - 62
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812