Stem-loop mdm-MIR10991c

Accession

MI0035617

Description

Malus domestica mdm-MIR10991c precursor miRNA

Sequence

caaaugamuugaguccaaagaucaaaugaucCGAGCCAUUGAAAUUCGAUCCaacggcugcaauuuuuauaacuuuuagaggaccccuuguuuguwgucguuggaucaaauuucaaugacucggaucauuugaugagugggg
.............((((...(((((((((((((((.((((((((((.(((((((((((.((((...............((((...))))..)))).))))))))))).)))))))))).)))))))))))))))...)))).

Structure

caaaugamuugag    aag               C          C           u    uuuuuauaacuuuua    a 
             ucca   aucaaaugaucCGAG CAUUGAAAUU GAUCCaacggc gcaa               gagg  
             ||||   ||||||||||||||| |||||||||| ||||||||||| ||||               |||| c
             gggu   uaguuuacuaggcuc guaacuuuaa cuagguugcug uguu               uucc  
------------g    gag               a          a           w    -------------ug    c 

Annotation confidence Not enough data

Genome context

MDC000600.449: 4580-4721 [+]

Mature mdm-miR10991c

• Accession: MIMAT0043563
• Description: Malus domestica mdm-miR10991c mature miRNA
• Sequence: 32 - CGAGCCAUUGAAAUUCGAUCC - 52
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812