Accession
MI0035633
Description
Malus domestica
mdm-MIR10996a precursor miRNA
Sequence
880
reads,
67.0
reads per million, 27 experiments
uucucgagaagagcugacaugcAACUGAGAUGCUAAGGUGAUGguauuccaaaccaaccaugcuaugucauguugaaaaguuaaaacauaugacgguuugwgaugggcuugaaaugccaACACCAUCGCAUCUCAUGUUCCacguaaguuacucuccacu
.....((((..((((.((.((.(((((((((((...((((.(((((((.(((.(((.(((.(((..(((((((..............)))))))))).)).).)))..))).))))))).))))...)))))))).))).)).)).))))..))))....
.....((((..((((.((.((.(((((((((((...((((.(((((((.(((.(((.(((.(((..(((((((..............)))))))))).)).).)))..))).))))))).))))...)))))))).))).)).)).))))..))))....
Structure
uucuc ag g a c - UAA A c -a a - u au ugaaaa
gaga agcu ac ug AAC UGAGAUGC GGUG UGguauu caa cca c ca gcu gucaugu g
|||| |||| || || ||| |||||||| |||| ||||||| ||| ||| | || ||| |||||||
cucu uuga ug aC UUG ACUCUACG CCAC accguaa guu ggu g gu ugg caguaua u
-ucac ca a c C U CUA A a cg a w u -- caaaau
Annotation confidence
High
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Genome context
MDC010449.276: 6773-6932 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mdm-MIR10996a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mdm-miR10996a-5p
| Accession | MIMAT0056783 |
| Description | Malus domestica mdm-miR10996a-5p mature miRNA |
| Sequence | 23 - AACUGAGAUGCUAAGGUGAUG - 43 |
| Evidence |
experimental
unknown |
Mature mdm-miR10996a-3p
| Accession | MIMAT0043580 |
| Description | Malus domestica mdm-miR10996a-3p mature miRNA |
| Sequence | 120 - ACACCAUCGCAUCUCAUGUUCC - 141 |
| Evidence |
experimental
Illumina [1] |
References
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