Stem-loop mdm-MIR10997

Accession

MI0035634

Description

Malus domestica mdm-MIR10997 precursor miRNA

Sequence

gauguacuuauggauguugcuUAACCUUAUUUGAUUUCACGAcauugaacugcacuuucraacascuggaaggaauacaaugccaugaaaucaaauaagguuaagccacauuguuggccugca
..((((((....(((((.(((((((((((((((((((((.(.(((((.....(.(((((........))))))....))))).).))))))))))))))))))))).)))))...))..))))

Structure

ga    --  uaug     u                     C A     aacug a     raa 
  ugua  cu    gaugu gcuUAACCUUAUUUGAUUUCA G cauug     c cuuuc   c
  ||||  ||    ||||| ||||||||||||||||||||| | |||||     | |||||    
  acgu  gg    uuaca cgaauuggaauaaacuaaagu c guaac     g gaagg   a
--    cc  -uug     c                     a c     -auaa -     ucs 

Annotation confidence Not enough data

Genome context

MDC018695.28: 16542-16664 [-]

Mature mdm-miR10997

• Accession: MIMAT0043581
• Description: Malus domestica mdm-miR10997 mature miRNA
• Sequence: 22 - UAACCUUAUUUGAUUUCACGA - 42
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812