Stem-loop mdm-MIR393h

Accession

MI0035637

Description

Malus domestica mdm-MIR393h precursor miRNA

Literature search

6 open access papers mention mdm-MIR393h
(31 sentences)

Sequence

uuaauugcuucuagaggaggcauccaaagggaucgcauugaucccagcuaacuauuuauguccaucgcuugguuuggAUCAUGCUAUCCCUUUGGAUUucuccuuuggaagcuucaa
......((((((((((((((.((((((((((((.((((.(((((.((((((.................)))))).))))))))).)))))))))))).)))))))))))))).....

Structure

uuaauu              c            c    u     c      cuauuua 
      gcuucuagaggagg auccaaagggau gcau gaucc agcuaa       u
      |||||||||||||| |||||||||||| |||| ||||| ||||||       g
      cgaagguuuccucu UAGGUUUCCCUA CGUA CUAgg uugguu       u
-aacuu              U            U    -     u      cgcuacc 

Annotation confidence Not enough data

Genome context

MDC012883.431: 61501-61617 [-]

Mature mdm-miR393h

• Accession: MIMAT0043584
• Description: Malus domestica mdm-miR393h mature miRNA
• Sequence: 78 - AUCAUGCUAUCCCUUUGGAUU - 98
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812