Stem-loop mdm-MIR10999b

Accession

MI0035645

Description

Malus domestica mdm-MIR10999b precursor miRNA

Sequence

auacacuauagGGGCGUGAUAUUCACACACCUcauuuuacauuuuacuuuucacacaacaagagcuguguaagaaguaaaaaugggguguguggauaucacaccccuacacuaua
........((((((.(((((((((((((((((((((((......(((((((.(((((........))))).)))))))))))))))))))))))))))))).)))))).......

Structure

auacacua      C                       acauuu       c     aca 
        uagGGG GUGAUAUUCACACACCUcauuuu      uacuuuu acaca   a
        |||||| |||||||||||||||||||||||      ||||||| |||||    
        aucccc cacuauaggugugugggguaaaa      augaaga ugugu   g
-auaucac      a                       ------       a     cga 

Annotation confidence Not enough data

Genome context

MDC011592.184: 1253-1367 [+]

Mature mdm-miR10999b

• Accession: MIMAT0043592
• Description: Malus domestica mdm-miR10999b mature miRNA
• Sequence: 12 - GGGCGUGAUAUUCACACACCU - 32
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812