Stem-loop mdm-MIR10981c

Accession

MI0035646

Description

Malus domestica mdm-MIR10981c precursor miRNA

Sequence

gcuugggcuaaggagccaccugaccaauacauaagggucguuggauuuugauccaacgacuacaaacaggggguucucuaaaaauuauaaugaugauuguAGCCGUUUAAUCAAAAUCCAAcgauccuuguguguugguaggaggcuccugagcuuggag
..(((((((.(((((((.((((.(((((((((((((((((((((((((((((..((((.((((((.((((((...))))..............)).)))))).))))..))))))))))))))))))))))))))))))))).))))))).)))))))..

Structure

gc       a       a    a                             cc    a      a  --------------    g 
  uugggcu aggagcc ccug ccaauacauaagggucguuggauuuugau  aacg cuacaa ca              gggg  
  ||||||| ||||||| |||| |||||||||||||||||||||||||||||  |||| |||||| ||              |||| u
  gguucga uccucgg ggau gguuguguguuccuagcAACCUAAAACUA  UUGC GAuguu gu              ucuc  
ga       g       a    -                             AU    C      a  aguaauauuaaaaa    u 

Annotation confidence Not enough data

Genome context

MDC004588.287: 5215-5374 [+]

Mature mdm-miR10981c

• Accession: MIMAT0043593
• Description: Malus domestica mdm-miR10981c mature miRNA
• Sequence: 101 - AGCCGUUUAAUCAAAAUCCAA - 121
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812