Stem-loop mdm-MIR11004

Accession

MI0035655

Description

Malus domestica mdm-MIR11004 precursor miRNA

Sequence

ugaauuugggacgaguuuuguggugguguugaagggagguggugguugaugggaauuuggugcuauccuaccugagcuuuuucuucguauuucuauauucguuccuaccGUAUUCUUUCAUCUUCUACUAcuuaucgaucccuucccuu
.......(((((((.....(((((((...((((((((..((((((.((((((((((..((((......))))................)))))))...)))...))))))..))))))))....)))))))...))).)))).......

Structure

ugaauuu    -   guuuu       -ugu        gg      --u   ---       --------------uu    cu 
       ggga cga     guggugg    ugaaggga  uggugg   uga   ugggaau                ggug  a
       |||| |||     |||||||    ||||||||  ||||||   |||   |||||||                ||||   
       cccu gcu     cAUCAUC    ACUUUCUU  Gccauc   gcu   aucuuua                ccau  u
uucccuu    a   --auu       UUCU        AU      cuu   uau       ugcuucuuuuucgagu    cc 

Annotation confidence Not enough data

Genome context

MDC005752.143: 30222-30370 [-]

Mature mdm-miR11004

• Accession: MIMAT0043603
• Description: Malus domestica mdm-miR11004 mature miRNA
• Sequence: 110 - GUAUUCUUUCAUCUUCUACUA - 130
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812