Stem-loop mdm-MIR10996b

Accession

MI0035673

Description

Malus domestica mdm-MIR10996b precursor miRNA

Sequence

cucucgagaagagcuaacuuguaacugagaugccaaggugauaguauuucaaacuaaucauguuauuauguugaaaaguugaaacauaauggugucugacgggcuuggaaugccaUCACCAUUGCAUCUCAUGUUCCauguaaguuaaucucaucu
.....((((..((((.((.((.(((((((((((...((((((.(((((((((.((..(((..((((((((((..........))))))))))....)))..)).))))))))).))))))...)))))))).))).)).)).))))..))))....

Structure

cucuc    ag    a  u  u   -        caa      a         a  aa   --ug          gaaa 
     gaga  agcu ac ug aac ugagaugc   ggugau guauuucaa cu  uca    uuauuauguu    a
     ||||  |||| || || ||| ||||||||   |||||| ||||||||| ||  |||    ||||||||||     
     cucu  uuga ug aC UUG ACUCUACG   CCACUa cguaagguu gg  agu    gguaauacaa    g
-ucua    aa    a  u  C   U        UUA      c         c  gc   cugu          aguu 

Annotation confidence Not enough data

Genome context

MDC001018.298: 1432-1587 [-]

Mature mdm-miR10996b

• Accession: MIMAT0043622
• Description: Malus domestica mdm-miR10996b mature miRNA
• Sequence: 116 - UCACCAUUGCAUCUCAUGUUCC - 137
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812