Stem-loop mdm-MIR11015

Accession

MI0035675

Description

Malus domestica mdm-MIR11015 precursor miRNA

Sequence

auauauuuuuuuuuucuuaaugggucauaacgagucgggucauuuuacuuguUGGGUAAAAUGACCCAACCUGuuaagaaccgguuaagauaauggguguga
.(((((((......(((((((.((((.(((((.((.((((((((((((((...)))))))))))))).)).))))).).))).)))))))....))))))).

Structure

a       uuuuuu       g   - a     a  c              g 
 uauauuu      ucuuaau ggu c uaacg gu gggucauuuuacuu  
 |||||||      ||||||| ||| | ||||| || |||||||||||||| u
 guguggg      agaauug cca g auuGU CA CCCAGUAAAAUGGG  
a       --uaau       g   a a     C  A              U 

Annotation confidence Not enough data

Genome context

MDC006414.458: 15258-15359 [+]

Mature mdm-miR11015

• Accession: MIMAT0043624
• Description: Malus domestica mdm-miR11015 mature miRNA
• Sequence: 53 - UGGGUAAAAUGACCCAACCUG - 73
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812