Stem-loop seu-MIR11022

Accession

MI0035685

Description

Salicornia europaea seu-MIR11022 precursor miRNA

Sequence

ucgaggcucuagugcuucacccucacuagcuacggccuacgcguccuacugaacauaacaaaguaaccagaccuaaagggucuaaacccccccaagcuaggaaaaaagcaucgucaCGAGGCUGUGGGUGGAGAGGUcuagaucucg
.(((((.(((((........((((.(((.(((((((((.((.(.(.((((...........))))...((((((...))))))............(((........)))...).).))))))))))).))).)))).))))))))))

Structure

u     c     ugcuucac    a   g         a  c u ------cuacugaacauaacaaaguaacc      a 
 cgagg ucuag        ccuc cua cuacggccu cg g c                             agaccu  
 ||||| |||||        |||| ||| ||||||||| || | |                             |||||| a
 gcucu agauc        GGAG GGU GGUGUCGGA GC c g                             ucuggg  
-     -     -------U    A   G         -  a u cuacgaaaaaaggaucgaacccccccaaa      a 

Annotation confidence Not enough data

Genome context

Unknown

Mature seu-miR11022

• Accession: MIMAT0043634
• Description: Salicornia europaea seu-miR11022 mature miRNA
• Sequence: 117 - CGAGGCUGUGGGUGGAGAGGU - 137
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25848810
   High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea
   Feng J, Wang J, Fan P, Jia W, Nie L, Jiang P, Chen X, Lv S, Wan L, Chang S, Li S, Li Y
   BMC Plant Biol (2015) 15:63