Stem-loop seu-MIR11025

Accession

MI0035688

Description

Salicornia europaea seu-MIR11025 precursor miRNA

Sequence

cucaauagugcuucccauuucugacccuucaggagggccuacugaagaggaggccgagagcaugucgggcggcucuuaccuuccuggcuacuccgggaaggagaagcuggacguuguccgcgggaugcucaaaggaguucccaaggagguagcccacaacaUGAAGGGCUUUCAUGAUGGGCAuauuaugccc
....((((((...((((((..(((((((((((..((((.((((.(((((..(.((((.......)))).)..))))).(((((((((.....)))))))))....((.((((...))))))((((.((((....)))))))).....))))))))....).)))))))...))).))))))..))))))....

Structure

cuca      cuu      uc   ---       - --ga    c    ---------------------------------------------------------------------g     ga g    ga 
    auagug   cccauu  uga   cccuuca g    gggc uacu                                                                      aagag  g ccga  g
    ||||||   ||||||  |||   ||||||| |    |||| ||||                                                                      |||||  | ||||  c
    uauuau   GGGUAG  ACU   GGGAAGU c    cccg augg                                                                      uucuc  c ggcu  a
cccg      -AC      -U   UUC       a aaca    -    aggaacccuugaggaaacucguagggcgccuguugcaggucgaagaggaagggccucaucgguccuucca     gg g    gu 

Annotation confidence Not enough data

Genome context

Unknown

Mature seu-miR11025

• Accession: MIMAT0043637
• Description: Salicornia europaea seu-miR11025 mature miRNA
• Sequence: 162 - UGAAGGGCUUUCAUGAUGGGCA - 183
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25848810
   High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea
   Feng J, Wang J, Fan P, Jia W, Nie L, Jiang P, Chen X, Lv S, Wan L, Chang S, Li S, Li Y
   BMC Plant Biol (2015) 15:63