Stem-loop seu-MIR11027

Accession

MI0035690

Description

Salicornia europaea seu-MIR11027 precursor miRNA

Sequence

cugucguagaUGGUAGAACAUUCUAGAGUAGAAaauucuagauuaguauaaucuagcguggaaugaucuagauuagaagaaccuaccuauauuaguaaaggagaugauacaauaaucaucaucgauacucuaggauguucauguauuaauacuaggauuc
..(((.(((.((((((((((((((((((((.......((((((((...)))))))).((((..(..((((...))))..)..))))..............((((((((......)))))).))..)))))))))))))))...)))))...))).)))..

Structure

cu   g   --a     ---               ------------GAAaauucuagauuaguauaaucuagc    aa ga    g 
  guc uag   UGGUA   GAACAUUCUAGAGUA                                       gugg  u  ucua  
  ||| |||   |||||   |||||||||||||||                                       ||||  |  |||| a
  uag auc   auuau   cuuguaggaucucau                                       cauc  a  agau  
cu   g   aua     gua               agcuacuacuaauaacauaguagaggaaaugauuauauc    ca ga    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature seu-miR11027

• Accession: MIMAT0043639
• Description: Salicornia europaea seu-miR11027 mature miRNA
• Sequence: 11 - UGGUAGAACAUUCUAGAGUAGAA - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25848810
   High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea
   Feng J, Wang J, Fan P, Jia W, Nie L, Jiang P, Chen X, Lv S, Wan L, Chang S, Li S, Li Y
   BMC Plant Biol (2015) 15:63