Stem-loop seu-MIR11028

Accession

MI0035691

Description

Salicornia europaea seu-MIR11028 precursor miRNA

Sequence

ucugauguguuauugauagaguauauaacauauuccugggcuucaaccaaaagcuuaaguugauaauuaaggcccgAGAAUAUGUUAUAUACUCUAUCAguuaugugag
.((.(((((..((((((((((((((((((((((((.(((((((((((...........))))).......)))))).))))))))))))))))))))))))))))).))

Structure

u  g     uu                        c      -------     caaa 
 cu augug  auugauagaguauauaacauauuc ugggcu       ucaac    a
 || |||||  |||||||||||||||||||||||| ||||||       |||||    g
 ga uguau  ugACUAUCUCAUAUAUUGUAUAAG gcccgg       aguug    c
-  g     --                        A      aauuaau     aauu 

Annotation confidence Not enough data

Genome context

Unknown

Mature seu-miR11028

• Accession: MIMAT0043640
• Description: Salicornia europaea seu-miR11028 mature miRNA
• Sequence: 77 - AGAAUAUGUUAUAUACUCUAUCA - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25848810
   High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea
   Feng J, Wang J, Fan P, Jia W, Nie L, Jiang P, Chen X, Lv S, Wan L, Chang S, Li S, Li Y
   BMC Plant Biol (2015) 15:63