Stem-loop seu-MIR319

Accession

MI0035698

Description

Salicornia europaea seu-MIR319 precursor miRNA

Literature search

1 open access papers mention seu-MIR319
(5 sentences)

Sequence

gaauuaaggggguuugaauuaucugccgacucauucauucaaacacucaguagaacgaaacuuuuacaacgaggugcuacugugauugCGUGAAUGAUGCGGGAGAUAGuuucauccuucuccuucugu
(((...((((((...(((((((((.(((..((((((((.(((.(((..(((((.((.................)).)))))))).))).))))))))..))).)))))))))...))))))..)))...

Structure

---   uua      uuu         g   ac        u   a   uc     a  gaaacuu 
   gaa   aggggg   gaauuaucu ccg  ucauucau caa cac  aguag ac       u
   |||   ||||||   ||||||||| |||  |||||||| ||| |||  ||||| ||       u
   cuu   ucuucc   uuuGAUAGA GGC  AGUAAGUG guu gug  ucauc ug       a
ugu   -cc      uac         G   GU        C   a   --     g  gagcaac 

Annotation confidence Not enough data

Genome context

Unknown

Mature seu-miR319

• Accession: MIMAT0043647
• Description: Salicornia europaea seu-miR319 mature miRNA
• Sequence: 89 - CGUGAAUGAUGCGGGAGAUAG - 109
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25848810
   High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea
   Feng J, Wang J, Fan P, Jia W, Nie L, Jiang P, Chen X, Lv S, Wan L, Chang S, Li S, Li Y
   BMC Plant Biol (2015) 15:63