Stem-loop seu-MIR11039

Accession

MI0035704

Description

Salicornia europaea seu-MIR11039 precursor miRNA

Sequence

caacuaaaauUGGAAAUUGUUGCUAGUAAUUCAuuacagagggaguaguuuuuugaucuguacaagacauaguggcagacaacguucugaguuauuuau
.........((((((.(((((((((.((..((..((((((..(((......)))..))))))...))..)).))))).))))..)))))).........

Structure

caacuaaaa      -A    -     G  AU  -Au      gg   ua 
         uUGGAA  UUGU UGCUA UA  UC   uacaga  gag  g
         ||||||  |||| ||||| ||  ||   ||||||  |||   
         agucuu  aaca acggu au  ag   augucu  uuu  u
uauuuauug      gc    g     g  ac  aac      ag   uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature seu-miR11039

• Accession: MIMAT0043653
• Description: Salicornia europaea seu-miR11039 mature miRNA
• Sequence: 11 - UGGAAAUUGUUGCUAGUAAUUCA - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25848810
   High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea
   Feng J, Wang J, Fan P, Jia W, Nie L, Jiang P, Chen X, Lv S, Wan L, Chang S, Li S, Li Y
   BMC Plant Biol (2015) 15:63