Stem-loop seu-MIR11046

Accession

MI0035711

Description

Salicornia europaea seu-MIR11046 precursor miRNA

Sequence

acuuauuugcAUGUGUUUGGGCGAAAAUAGGguguuuuggaacaaaacaagguauauaggucauuuuuggcuagauuuuuguuuucguucgcauguuccuaccg
........((((((....(((((((((((((((((((((...))))))).........(((((....)))))....))))))))))))))))))))........

Structure

acuuauuu      GUUU              ---------------------------       g 
        gcAUGU    GGGCGAAAAUAGGg                           uguuuug  
        ||||||    ||||||||||||||                           ||||||| a
        uguacg    cuugcuuuuguuuu                           acaaaac  
gccauccu      ----              uagaucgguuuuuacuggauauaugga       a 

Annotation confidence Not enough data

Genome context

Unknown

Mature seu-miR11046

• Accession: MIMAT0043660
• Description: Salicornia europaea seu-miR11046 mature miRNA
• Sequence: 11 - AUGUGUUUGGGCGAAAAUAGG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25848810
   High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea
   Feng J, Wang J, Fan P, Jia W, Nie L, Jiang P, Chen X, Lv S, Wan L, Chang S, Li S, Li Y
   BMC Plant Biol (2015) 15:63