Stem-loop eel-mir-11053

Accession

MI0035718

Description

Electrophorus electricus eel-mir-11053 precursor miRNA

Sequence

aggccuuccagcugcagcacagUCCAUGAGUCUCAGUUAGGAUGugcguuuugugucCAAACCGAGACUCAUGGACUGug
.(((......)))....(((((((((((((((((.(((.((((..((.....)))))).))).)))))))))))))))))

Structure

aggccuuccagcugcag                 A   A    Gu  g 
                 cacagUCCAUGAGUCUC GUU GGAU  gc u
                 ||||||||||||||||| ||| ||||  || u
                 guGUCAGGUACUCAGAG CAA Ccug  ug u
-----------------                 C   A    --  u 

Annotation confidence Not enough data

Genome context

scaffold23590: 76349-76428 [-]

Mature eel-miR-11053-5p

• Accession: MIMAT0043668
• Description: Electrophorus electricus eel-miR-11053-5p mature miRNA
• Sequence: 23 - UCCAUGAGUCUCAGUUAGGAUG - 44
• Evidence: experimental ; Illumina [1]

Mature eel-miR-11053-3p

• Accession: MIMAT0043669
• Description: Electrophorus electricus eel-miR-11053-3p mature miRNA
• Sequence: 58 - CAAACCGAGACUCAUGGACUG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25887781
   Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
   Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
   BMC Genomics (2015) 16:243