Stem-loop eel-mir-11058

Accession

MI0035725

Description

Electrophorus electricus eel-mir-11058 precursor miRNA

Sequence

uccagAUCACUGCAUUGUUCUGUCCAGgugccugcgaagaucccgacgucggugaggccgaacggaacaacgcguuuagugagc
......(((((((.(((((((((...((((((.(((..(....)..))).)))...)))..))))))))).))....)))))..

Structure

uccagA     ----  A         CCA   ---   u   aa a 
      UCACU    GC UUGUUCUGU   Ggu   gcc gcg  g u
      |||||    || |||||||||   |||   ||| |||  |  
      aguga    cg aacaaggca   ccg   ugg ugc  c c
----cg     uuug  c         -ag   gag   c   ag c 

Annotation confidence Not enough data

Genome context

scaffold9849: 28000-28083 [+]

Mature eel-miR-11058-5p

• Accession: MIMAT0043682
• Description: Electrophorus electricus eel-miR-11058-5p mature miRNA
• Sequence: 6 - AUCACUGCAUUGUUCUGUCCAG - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25887781
   Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
   Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
   BMC Genomics (2015) 16:243