Stem-loop eel-mir-11065

Accession

MI0035734

Description

Electrophorus electricus eel-mir-11065 precursor miRNA

Sequence

ccaccgagccccucuugcUGCAGGGAGACUGUUUGAAACUgugcugccaaucuagUUUACAGACAGCUCUCUGAAGUaau
.....(((...)))(((((.(((((((.(((((((((((((...........)))))).)))))))))))))).))))).

Structure

ccaccgagccccuc     G       A       -      ugcu 
              uugcU CAGGGAG CUGUUUG AAACUg    g
              ||||| ||||||| ||||||| ||||||    c
              aaUGA GUCUCUC GACAGAC UUUgau    c
-------------u     A       -       A      cuaa 

Annotation confidence Not enough data

Genome context

scaffold24570: 23698-23777 [-]

Mature eel-miR-11065-5p

• Accession: MIMAT0043696
• Description: Electrophorus electricus eel-miR-11065-5p mature miRNA
• Sequence: 19 - UGCAGGGAGACUGUUUGAAACU - 40
• Evidence: experimental ; Illumina [1]

Mature eel-miR-11065-3p

• Accession: MIMAT0043697
• Description: Electrophorus electricus eel-miR-11065-3p mature miRNA
• Sequence: 56 - UUUACAGACAGCUCUCUGAAGU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25887781
   Unique patterns of transcript and miRNA expression in the South American strong voltage electric eel (Electrophorus electricus)
   Traeger LL, Volkening JD, Moffett H, Gallant JR, Chen PH, Novina CD, Phillips GN Jr, Anand R, Wells GB, Pinch M, Güth R, Unguez GA, Albert JS, Zakon H, Sussman MR, Samanta MP
   BMC Genomics (2015) 16:243